‘Living fossil’ Coelacanth genome sequenced


The genetic secrets of a “living fossil” have been revealed by scientists.

The coelacanth is thought to have changed very little over millions of years

The coelacanth is thought to have changed very little over millions of years

Researchers sequenced the genome of the coelacanth: a deep-sea fish that closely resembles its ancestors, which lived at least 300 million years ago.

The study found that some of the animal’s genes evolved very slowly, giving it its primitive appearance.

The work also shed light on how the fish was related to the first land-based animals.

The coelacanth has four large, fleshy fins, which some scientists believe could have been the predecessors of limbs.

It had been suggested that this fish was closely related to early tetrapods – the first creatures to drag themselves out of the ocean, giving rise to life on land.

But the study, published in the journal Nature, suggested that another fish called the lungfish, which also has four limbs, had more genes in common with land-based animals.

Slow to change

The coelacanth can reach up to 2m-long and is found lurking in caves deep beneath the waves.

It was thought to have been extinct for millions of years, until it turned up in a trawlerman’s net off the coast of Africa in 1938.

Its ancient appearance has earned it the title “living fossil” – but it is so elusive, that it has been hard to study.

To find out more, an international team of researchers sequenced the coelacanth’s genome, which contained nearly three billion DNA bases.

“The lungfish-coelacanth question has gone back and forth over the years”

- Prof John Hutchinson Royal, Veterinary College

 

Professor Kerstin Lindblad-Toh, from the University of Uppsala in Sweden and the Broad Institute of MIT and Harvard in the US, said: “What we can see is that while the genome as whole changes, the protein-coding genes – that make the living fish – are much more stable and much more unchanging.

“And if you think about it, this might be correlated to the fact that the coelacanth lives in a rather extreme and stable environment.

“It lives several hundred metres down in the ocean, and it may also be in an environment where it doesn’t have a lot of competitors. So maybe it adapted to that environment a long time ago and it doesn’t have a huge need for change.”

The researchers also used the study to try and solve the long-standing question of whether the first tetrapods were more closely related to the coelacanth or the lungfish.

They compared DNA profiles of both of these fish with modern land-based animals, including mammals, birds and lizards.

“We selected 251 genes that were very similar in all these genomes so we could build this picture of how closely related these species were,” Prof Lindblad-Toh explained.

“From that picture it was clear the lungfish is closer to tetrapods than the coelacanth.”

Commenting on the research, John Hutchinson, professor of evolutionary biomechanics from the Royal Veterinary College, said it was an interesting study.

“The lungfish-coelacanth question has gone back and forth over the years; the lungfish answer is not new, but this is a much better, bigger dataset so it does tip the balance a bit,” he said.

“They are missing some critical animals – it would be interesting to see what addition of salamander or more ray-finned fish would do to their analysis, but it might not change anything important.”

This study is not the only one attempting to understand the coelacanth.

Since the fish was rediscovered in the 1930s, only a few hundred have ever been found, many of these dead caught up in trawls.

Scientists from the French organisation Andromede Oceanology are working with the Natural History Museum in Paris to attach acoustic tracking devices to the fish in order to study their behaviour and capture 3D moving images of their fins as they swim.

Source: Nature, BBC

Comments

  1. FISH DNA DOESN’T SUPPORT EVOLUTION OF LIMBS

    The recent news is that scientists have discovered that some snippets of DNA from a fish, they once thought was extinct, can cause mice to grow limbs. This is wrongly being hailed as evidence that fish had developed legs. Isn’t it interesting that the fish they got the DNA from didn’t have legs!

    These snippets of DNA from the fish seem to be “triggering” mechanisms. They can only trigger (“turn on”) formation of limbs if the genes for limbs first exist, and since genes for limbs exist in mice then these triggering mechanisms, even if from a fish, will work. None of this means fish evolved legs.

    Imagine an evolving fish having part fins and part feet, with the fins evolving into feet. Where’s the survival advantage? It can’t use either fins or feet efficiently. There are no fossils of such fish. These fish exist only on automobile bumper stickers!

    A partially evolved species, with partially evolved tissues and organs, waiting (supposedly) millions of years to evolve would be unfit for survival.

    Genetic and biological similarities between species are no proof of common ancestry. Such similarities are better and more logically explained due to a common Genetic Engineer or Designer (yes, God) who designed similar functions for similar purposes in various species. Genetic information, like other forms of information, cannot arise by chance, so it’s more rational to believe that DNA or genetic similarities between species are due to intelligent design.

    The genes already exist for micro-evolution (variations within a biological kind such as varieties of dogs, cats, horses, cows, etc.), but not for macro-evolution (variations across biological kinds such as from sea sponge to human). Only variations for already existing genes and traits are possible.

    Visit my Internet site: THE SCIENCE SUPPORTING CREATION

    Babu G. Ranganathan
    B.A. Bible/Biology

    Author of popular Internet article, TRADITIONAL DOCTRINE OF HELL EVOLVED FROM GREEK ROOTS

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